PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8D2WZ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 215aa    MW: 23778.7 Da    PI: 10.3826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8D2WZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39.4e-2194181285
                  EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
           B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                  +kvl++sdv+++gr+vlpkk ae+h  +++ + ++ + +ed  ++++W+++++y  ++ks++y+l+ ++ +FvkangL+egDf++++ +
  Araip.8D2WZ  94 QKVLKQSDVGSLGRIVLPKKEAETHlpELDARDGISIDMEDiGTSQVWNMRYRYwpNNKSRMYLLE-NTGDFVKANGLQEGDFIMIRGV 181
                  79*************************99999*********7777*********777777777777.*****************99844 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.1E-2884180IPR015300DNA-binding pseudobarrel domain
CDDcd100153.86E-3391178No hitNo description
SuperFamilySSF1019361.71E-2292181IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.85593197IPR003340B3 DNA binding domain
SMARTSM010192.2E-1693189IPR003340B3 DNA binding domain
PfamPF023623.9E-1794182IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MARQRKCSSN QRQNNHWGQP QNQSQIADTV IGAENWVCWQ GVAGAAASAP APALPAEPQP  60
ASLGQNHGHQ GRGSSDKRSQ GWKSSEKNLK FLLQKVLKQS DVGSLGRIVL PKKEAETHLP  120
ELDARDGISI DMEDIGTSQV WNMRYRYWPN NKSRMYLLEN TGDFVKANGL QEGDFIMIRG  180
VKVRQAGGTK SETKKAAGKS QKNQHTVINV FKDTV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016183710.11e-128PREDICTED: B3 domain-containing transcription factor ABI3-like isoform X2
SwissprotQ015932e-62ABI3_ARATH; B3 domain-containing transcription factor ABI3
TrEMBLI1KZD38e-80I1KZD3_SOYBN; Uncharacterized protein
STRINGGLYMA08G47240.12e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94483037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.12e-63B3 family protein